Kohji HOTTA

Kohji HOTTA

Ph.D.

Research Description

Development and Evolution of Chordate Animal, especially Ascidian.

Material

(lightbox)

A tailbud embryo of ascidian, Ciona robusta

Selected Journal Publications

  1. Takatoshi D Yokoyama, Kohji Hotta, Kotaro Oka: Comprehensive Morphological Analysis of Individual Peripheral Neuron Dendritic Arbors in Ascidian Larvae using the Photoconvertible Protein Kaede, Developmental Dynamics, 2014 Oct;243(10):1362-73.
  2. Mitsuru J Nakamura, Kohji Hotta, Kotaro Oka: Raman spectroscopic imaging of the whole Ciona intestinalis embryo during development. PLOS ONE, 2013 Aug 20;8(8):e71739.
  3. Nakamura MJ, Terai J, Okubo R, Hotta K, Oka K: Three-dimensional anatomy of the Ciona intestinalis tailbud embryo at single-cell resolution. Dev Biol 2012, 372:274-284.Cover Picture
  4. Kawada T, Ogasawara M, Sekiguchi T, Aoyama M, Hotta K, Oka K, Satake H: Peptidomic analysis of the central nervous system of the protochordate, Ciona intestinalis: homologs and prototypes of vertebrate peptides and novel peptides. Endocrinology 2011, 152:2416-2427.
  5. Terakubo HQ, Nakajima Y, Sasakura Y, Horie T, Konno A, Takahashi H, Inaba K, Hotta K, Oka K: Network structure of projections extending from peripheral neurons in the tunic of ascidian larva. Dev Dyn 2010, 239:2278-2287. DD ArtPix Developmental Dynamics. 2010 Aug;239(9)
  6. Tassy O, Dauga D, Daian F, Sobral D, Robin F, Khoueiry P, Salgado D, Fox V, Caillol D, Schiappa R, Laporte B, Rios A, Luxardi G, Kusakabe T, Joly JS, Darras S, Christiaen L, Contensin M, Auger H, Lamy C, Hudson C, Rothbacher U, Gilchrist MJ, Makabe KW, Hotta K, Fujiwara S, Satoh N, Satou Y, Lemaire P.: The ANISEED database: Digital representation, formalization, and elucidation of a chordate developmental program. Genome Res 2010.
  7. Endo T, Ueno K, Yonezawa K, Mineta K, Hotta K, Satou Y, Yamada L, Ogasawara M, Takahashi H, Nakajima A, et al.: CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality. Nucleic Acids Res 2010.
  8. Hotta K, Takahashi H, Satoh N, Gojobori T: Brachyury-downstream gene sets in a chordate, Ciona intestinalis: integrating notochord specification, morphogenesis and chordate evolution. Evol Dev 2008, 10:37-51.
  9. Hotta K, Mitsuhara K, Takahashi H, Inaba K, Oka K, Gojobori T, Ikeo K: A web-based interactive developmental table for the ascidian Ciona intestinalis, including 3D real-image embryo reconstructions: I. From fertilized egg to hatching larva. Dev Dyn 2007, 236:1790-1805.
  10. Hotta K, Yamada S, Ueno N, Satoh N, Takahashi H: Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos. Dev Growth Differ 2007, 49:373-382.

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